Michael G. Sadovsky, Ksenia A. Nikitina, “Very low ergodicity of real genomes”, J. Sib. Fed. Univ. Math. Phys., 2014, Volume 7, Issue 4,Pages <nobr>530

Very low ergodicity of real genomes

Michael G. Sadovsky^a, Ksenia A. Nikitina^b

^a Institute of computational modelling SB RAS, Akademgorodok, Krasnoyarsk, 660036 Russia
^b Institute of Space and Information Technology, Siberian Federal University, Kirenskogo 26, Krasnoyarsk, 660074, Russia

Abstract: A distribution of the longest distances to the nearest neighbour alongside a genetic sequence is investigated. It is shown the real DNA sequences differ basically from any model one, while the figures of the distribution prove almost lack of ergodicity in these latter.

Keywords: order, triplet, Markov process, distance, mutual distribution.

UDC: 57:015 + 573.2

Received: 30.08.2014
Received in revised form: 30.09.2014
Accepted: 05.11.2014

Language: English