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JOURNALS // Journal of Siberian Federal University. Mathematics & Physics // Archive

J. Sib. Fed. Univ. Math. Phys., 2018 Volume 11, Issue 3, Pages 329–330 (Mi jsfu679)

Combinatorial properties of restriction sites

Elizaveta A. Taranenko

Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Svobodny, 79, Krasnoyarsk, 660041, Russia

Abstract: Restriction sites are the strings in DNA recognised by their specific enzymes. Recognition of the sites is provided by their combinatoric pattern. This study presents some results obtained from 6-nucleotide long restriction sites analysis using duplet strength and editing distance methods.

Keywords: frequency, palindrome, string, editing distance, duplet strength.

UDC: 573.22 + 51-76

Received: 10.03.2018
Received in revised form: 20.04.2018
Accepted: 30.05.2018

Language: English

DOI: 10.17516/1997-1397-2018-11-3-329-330



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