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JOURNALS // Matematicheskaya Biologiya i Bioinformatika // Archive

Mat. Biolog. Bioinform., 2015 Volume 10, Issue 1, Pages 260–282 (Mi mbb225)

This article is cited in 5 papers

Data mining

Maya-K-PDB software for the three-dimensional modeling and visualization of the conformational dynamics of biomacromolecules

S. V. Filippovab, V. S. Sivozhelezovc, V. L. Kimab, V. V. Sychevab, M. N. Ustininab

a Institute of Mathematical Problems of Biology RAS, Pushchino, 142290, Russian Federation
b Pushchino State Institute of Natural Sciences, Pushchino, 142290, Russian Federation
c Institute of Cell Biophysics RAS, Pushchino, 142290, Russian Federation

Abstract: The concept of "active" molecular models was proposed. The Maya-K-PDB software for the creation of active molecular models in the 3D Maya environment was developed. The Maya-K-PDB provides various opportunities for dynamic visualization and modeling of conformational changes of biological macromolecules. Also many complicated processes on molecular level can be presented. The article describes the Maya-K-PDB user interface and illustrates basic examples of software implementation.

Key words: dynamic visualization, molecular model, kinematics, animation.

UDC: 577.29

Received 15.12.2014, Published 29.06.2015

DOI: 10.17537/2015.10.260



© Steklov Math. Inst. of RAS, 2024