RUS  ENG
Full version
JOURNALS // Matematicheskaya Biologiya i Bioinformatika // Archive

Mat. Biolog. Bioinform., 2024 Volume 19, Issue 1, Pages 248–260 (Mi mbb557)

Mathematical Modeling

On the thermalization of one-dimensional lattices. I. Microcanonical ensemble

G. A. Vinogradova, V. D. Lakhnob

a Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow
b Institute of Mathematical Problems of Biology RAS, Pushchino, Moskovskaya obl.

Abstract: In numerical simulation of biomacromolecule, the issues of thermalization, i.e., equal distribution of energy over the degrees of freedom, occupy an important place. In this paper we consider some mechanisms of lattice thermalization: Chirikov resonances, wave turbulence and some others. We consider thermalization in a microcanonical ensemble when the system is isolated from external fields and the total energy is conserved. Although microcanonical ensembles are rarely used in practical calculations, however, the basic ideas about the thermalization mechanisms are obtained for these systems. The main attention is paid to the consideration of the lattices thermalization with Fermi–Pasta–Ulam–Tsingou potentials, since the main efforts to understand the basis of thermalization have been made precisely for lattices of this type. The role of solitons and breathers in thermalization is discussed.

Key words: thermalization, microcanonical ensemble, ergodicity, FPUT lattice.

Received 13.05.2024, 12.06.2024

DOI: 10.17537/2024.19.248



Bibliographic databases:


© Steklov Math. Inst. of RAS, 2025