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JOURNALS // Matematicheskaya Biologiya i Bioinformatika // Archive

Mat. Biolog. Bioinform., 2010 Volume 5, Issue 2, Pages 124–137 (Mi mbb56)

Proceedings of The International Conference "Mathematical Biology and Bioinformatics"

Statistical analysis and prediction of disordered residues in protein structures

M. Yu. Lobanov, O. V. Galzitskaya

Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region

Abstract: Statistical data of occurrences of disordered residues in the middle and termini parts of protein chain have been obtained. A new method based on the Ising model (model of two states) for prediction of disordered residues from protein sequence alone has been developed. Testing of the method by using two additional databases demonstrates that it ranks among the five best methods.

Key words: disordered residues, Ising model, specificity, sensitivity.

UDC: 577.322

Received 22.11.2010, Published 02.12.2010



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