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TMF, 2013 Volume 176, Number 3, Pages 429–443 (Mi tmf8514)

This article is cited in 3 papers

Band structure of the spectra of Hamiltonians of regular polynucleotide duplexes

V. D. Lakhno, V. B. Sultanov

Institute for Mathematical Problems in Biology, RAS, Pushchino, Moscow Oblast, Russia

Abstract: We calculate the band structure of the spectra of Hamiltonians of regular DNA duplexes and show that in single-stranded periodic polynucleotides whose period is determined by the number $m$ of nucleotides in an elementary cell, the spectrum consists of $m$ nonintersecting energy bands. In DNA duplexes, the number of energy bands is equal to $2m$, and the bands can intersect. Discrete energy levels can be present in forbidden bands in the case of (semi)bounded chains or duplexes.

Keywords: block three-diagonal matrix, DNA, Schrödinger equation, Tamm level.

Received: 11.02.2013
Revised: 26.03.2013

DOI: 10.4213/tmf8514


 English version:
Theoretical and Mathematical Physics, 2013, 176:3, 1194–1206

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© Steklov Math. Inst. of RAS, 2024