Kovalenko Il'ya Borisovich

Publications in Math-Net.Ru

1. Molecular dynamics of tubulin protofilaments and the effect of taxol on their bending deformation
   
   Computer Research and Modeling, 16:2 (2024),  503–512
2. The impact of a catalytic site mutation on the shape and mechanics of tubulin protofilaments
   
   Mat. Biolog. Bioinform., 19:2 (2024),  393–401
3. Cationic biocides tend to embed into the inner layer of the model outer membrane vesicles of gram-negative bacteria: Computational insights
   
   Mat. Biolog. Bioinform., 19:2 (2024),  261–275
4. Analysis of Brownian and molecular dynamics trajectories of to reveal the mechanisms of protein-protein interactions
   
   Computer Research and Modeling, 15:3 (2023),  723–738
5. Role of charged amino acid residues of plastocyanin in interaction with cytochrome b$_6$f complex and photosystem i of higher plants: a study using the Brownian dynamics method
   
   Mat. Biolog. Bioinform., 18:2 (2023),  434–445
6. Design of a molecular dynamics model for high-performance computing of conformational changes in microtubule protofilaments associated with the anticancer drug taxol
   
   Mat. Biolog. Bioinform., 18:1 (2023),  105–112
7. Microtubule protofilament bending characterization
   
   Computer Research and Modeling, 12:2 (2020),  435–443
8. Combination of different simulation techniques in the complex model of photosynthetic membrane
   
   Computer Research and Modeling, 5:1 (2013),  65–81
9. Multi-particle brownian dynamics software ProKSim for protein-protein interactions modeling
   
   Computer Research and Modeling, 5:1 (2013),  47–64
10. Investigation of complex formation of flavodoxin and photosystem 1 by means of direct multiparticle computer simulation
    
    Computer Research and Modeling, 1:1 (2009),  85–91
11. The non-linear diffusion and thermal conductivity equation: group classification and exact solutions
    
    Regul. Chaotic Dyn., 8:2 (2003),  167–189